- ASREML R 3 VERSION HOW TO
- ASREML R 3 VERSION INSTALL
- ASREML R 3 VERSION MANUAL
- ASREML R 3 VERSION FULL
Older versions of the package and versions for older R versions are available from. However, the CRAN version, currently 4.3-31, is not updated as frequently as the version that is here and on GitHub. The package is also available from CRAN at and from the Github repo at. Windows binary R 4.1: asremlPlus_4.3-32.zip Windows binary R 4.0: asremlPlus_4.3-32.zip Package source: asremlPlus_4.
ASREML R 3 VERSION HOW TO
Two further vignettes show how to use asremlPlus for exploring and presenting predictions from a linear mixed model analysis in the context of a three-factor factorial experiment on ladybirds: one vignette, Ladybird.asreml vignette, uses asreml and asremlPlus to produce and present predictions the other vignette, Ladybird.lm vignette, uses lm to produce the predictions and asremlPlus to present the predictions. A second vignette is the Criteria vignette that illustrates the facilities in asremlPlus for producing and using information criteria. Also available is the Wheat.analysis vignette that shows how to select the terms to be included in a mixed model for an experiment that involves spatial variation it also illustrates diagnostic checking and prediction production and presentation for this example.
ASREML R 3 VERSION MANUAL
Otherwise, you could consult the manual using vignette("Manual", package = "asremlPlus").
ASREML R 3 VERSION INSTALL
For example, is a plotPredictions method for a ame and can be called using just plotPredictions the object supplied to data must be a ame.įor more information, install the package and run the R command news(package = “asremlPlus”).
ASREML R 3 VERSION FULL
In particular, most functions are S3 methods and so the object supplied for the first argument must be of the class (the name after the last full stop in the function name) for which the function is a method and the class of the object can be omitted from the function name when calling the function. Versions 4.x-xx of asremlPlus are a major revamp of the package and include substantial syntax changes.
Its alldiffs and ame methods can be applied to objects produced with other mixed modelling software. The current version is compatible with both ASReml-R versions 3 and 4.1, but not 4.0. Our GitHub repositories can be found here.The asremlPlus package is a collection of R functions to augment ASReml-R in fitting mixed models and packages generally in exploring prediction differences. Navigation document: A helpful guide to assist existing users in transitioning from ASReml-R Version 3 to Version 4. Reference Manual: A comprehensive guide to the complete functionality of ASReml-R Version 4.
Pedicure: The pedicure package provides tools for pedigrees and genetic marker matrices.
Optimal Design: The odw package generates optimal experimental designs under the linear mixed model. Also enables extraction and plotting of the components of the splines. TPSbits: Creates structures to enable ASReml-R to fit the 2D tensor-product splines of Rodriguez-Alvarez et al (2018, Spatial Statistics 23, 52-71). The following packages are available for download from their respective pages:ĪSExtras4: Utility functions for ASReml objects: diagnostic tools for the meta-analysis of a series of spatially defined field experiments. Is to foster and support the use of linear and generalised linear mixed models, with particular application to plant and animal breeding data.
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